Publikace v časopisech

1.

Spasovová M., Kapitán J., Jílek Š., Para Kkadan M.S., Klener J., Lynn Jr. N.S., Kopecký Jr. V., Baumruk V., Profant V.: Probing solution conformations of l-DOPA: Integration of experiment and simulation via vibrational optical activity. Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy, 2024, vol. 313, p. 124119.

2.

Pazderková M., Profant V., Maloň P., Dukor R.K., Čeřovský V., Baumruk V., Bednárová L.: Chiroptical Properties and Conformation of Four Lasiocepsin-Related Antimicrobial Peptides: Structural Role of Disulfide Bridges. Symmetry, 2020, vol. 12, p. 812 (22.

3.

Profant V., Johannessen C., Blanch E.W., Bouř P., Baumruk V.: Effects of sulfation and the environment on the structure of chondroitin sulfate studied via Raman optical activity. Physical Chemistry Chemical Physics, 2019, vol. 21, p. 7367-7377.

4.

Profant V., Jegorov A., Bouř P., Baumruk V.: Absolute Configuration Determination of a Taxol Precursor Based on Raman Optical Activity Spectra. The Journal of Physical Chemistry B, 2017, vol. 121, p. 1544-1551.

5.

Kopecký Jr. V., Ettrich R., Pazderka T., Hofbauerová K., Řeha D., Baumruk V.: Influence of ligand binding on structure and thermostability of human alpha(1)-acid glycoprotein. Journal of Molecular Recognition, 2016, vol. 29, p. 70-79.

6.

Pazderková M., Profant V., Seidlerová B., Dlouhá H., Hodačová J., Jávorfi T., Siligardi G., Baumruk V., Bednárová L., Maloň P.: Electronic Circular Dichroism of the Chiral Rigid Tricyclic Dilactam with Nonplanar Tertiary Amide Groups. Journal of Physical Chemistry B, 2014, vol. 118, p. 11100-11108.

7.

Profant V., Pazderková M., Pazderka T., Maloň P., Baumruk V.: Relative intensity correction of Raman optical activity spectra facilitates extending the spectral region. J. Raman Spectrosc., 2014, vol. 45, p. 603-609.

8.

Hudecová J., Profant V., Novotná P., Baumruk V., Urbanová M., Bouř P.: CH Stretching Region: Computational Modeling of Vibrational Optical Activity. Journal of Chemical Theory and Computation, 2013, vol. 9, p. 3096-3108.

9.

Pazderková M., Profant V., Hodačová J., Šebestík J., Pazderka T., Novotná P., Urbanová M., Šafařík M., Buděšínský M., Tichý M., Bednárová L., Baumruk V., Maloň P.: Nonplanar Tertiary Amides in Rigid Chiral Tricyclic Dilactams. Peptide Group Distortions and Vibrational Optical Activity. J. Phys. Chem. B, 2013, vol. 117, p. 9626-9642.

10.

Profantová (roz. Řezáčová) B., Profant V., Zíma V., Kopecký Jr. V., Bednárová L., Zentz C., Baumruk V., Turpin P.Y., Štěpánek J.: Protonation effect of tyrosine in a segment of the SRF transcription factor: A combined optical spectroscopy, molecular dynamics, and density functional theory calculation study. Journal of Physical Chemistry B, 2013, vol. 117, p. 16086-16095.

11.

Pazderková M., Bednárová L., Dlouhá H., Flegel M., Lebl M., Hlaváček J., Setnička V., Urbanová M., Hynie S., Klenerová V., Baumruk V., Maloň P.: Electronic and vibrational optical activity of several peptides related to neurohypophyseal hormones; disulfide group conformation. Biopolymers, 2012, vol. 97, p. 923-932.

12.

Kopecký Jr. V., Baumruk V.: Kam kráčí Ramanova optická aktivita aneb ohlédnutí za uplynulými 40 lety. Chemické listy, 2011, vol. 105, p. 162-169.

13.

Profant V., Baumruk V., Li X., Šafařík M., Bouř P.: Tracking of the Polyproline Folding by Density Functional Computations and Raman Optical Activity Spectra. The Journal of Physical Chemistry B, 2011, vol. 115, p. 15079-15089.

14.

Ivani I., Baumruk V., Bouř P.: A Fourier Transform Method for Generation of Anharmonic Vibrational Molecular Spectra. Journal of Chemical Theory and Computation, 2010, vol. 6, p. 2095-2102.

15.

Maloň P., Bednárová L., Strizlik L., Krejčí L., Kumprecht L., Kraus T., Kubáňová M., Baumruk V.: Disulfide chromophore and its optical activity. Chirality, 2010, vol. 22, p. 47-55.

16.

Kubáňová M., Bednárová L., Maloň P., Baumruk V.: Raman Optical Activity of Amide and Disulfide Groups in Peptides and Model Systems. XXII INTERNATIONAL CONFERENCE ON RAMAN SPECTROSCOPY (AIP Conference Proceedings, 2010, vol. 1267, p. 841-842.

17.

Profant V., Šafařík M., Bouř P., Baumruk V.: Raman optical aktivity study of poly-L-proline chains of various lengths. Spectroscopy-an International Journal, 2010, vol. 24, p. 213-217.

18.

Hudecová J., Kapitán J., Baumruk V., Hammer R.P., Keiderling T.A., Bouř P.: Side Chain and Flexibility Contributions to the Raman Optical Activity Spectra of a Model Cyclic Hexapeptide. Journal of Physical Chemistry A, 2010, vol. 114, p. 7642-7651.

19.

Kaminský J., Kapitán J., Baumruk V., Bednárová L., Bouř P.: Interpretation of Raman and Raman Optical Activity Spectra of a Flexible Sugar Derivative, the Gluconic Acid Anion. The Journal of Physical Chemistry A, 2009, vol. 113, p. 3594-3601.

20.

Šebek J., Kapitán J., Šebestík J., Baumruk V., Bouř P.: L-Alanyl-L-alanine Conformational Changes Induced by pH As Monitored by the Raman Optical Activity Spectra. The Journal of Physical Chemistry A, 2009, vol. 113, p. 7760-7768.

21.

Buděšínský M., Daneček P., Bednárová L., Kapitán J., Baumruk V., Bouř P.: Comparison of quantitative conformer analyses by nuclear magnetic resonance and Raman optical activity spectra for model dipeptides. The Journal of Physical Chemistry A, 2008, vol. 112, p. 8633-8640.

22.

Buděšínský M., Šebestík J., Bednárová L., Baumruk V., Šafařík M., Bouř P.: Conformational properties of the Pro-Gly motif in the D-Ala-L-Pro-Gly-D-Ala model peptide explored by a statistical analysis of the NMR, Raman, and Raman optical activity spectra. The Journal of Organic Chemistry, 2008, vol. 73, p. 1481-1489.

23.

Baumruk V., Kapitán J., Kopecký Jr. V., Bouř P., Maloň P.: Raman Optical Activity of Biomolecules: From Simple Models to Complex Systems. Perspectives in Vibrational Spectroscopy (AIP Conference Proceedings), 2008, vol. 1075, p. 23-27.

24.

Daneček P., Kapitán J., Baumruk V., Bednárová L., Kopecký Jr. V., Bouř P.: Anharmonic effects in IR, Raman, and Raman optical activity spectra of alanine and proline zwitterions. The Journal of Chemical Physics, 2007, vol. 126, p. 224513.

25.

Ettrich R., Kopecký Jr. V., Hofbauerová K., Baumruk V., Novák P., Pompach P., Man P., Plíhal O., Kutý M., Kulik N., Sklenář J., Ryšlavá H., Křen V., Bezouška K.: Structure of the dimeric N-glycosylated form of fungal beta-N-acetylhexosaminidase revealed by computer modeling, vibrational spectroscopy, and biochemical studies. BMC Structural Biology, 2007, vol. 7, p. 32.

26.

Kapitán J., Baumruk V., Kopecký Jr. V., Bouř P.: Conformational flexibility of L-alanine Zwitterion determines shapes of Raman and Raman optical activity spectral bands. The Journal of Physical Chemistry A, 2006, vol. 110, p. 4689-4696.

27.

Kapitán J., Baumruk V., Bouř P.: Demonstration of the ring conformation in polyproline by the Raman optical activity. Journal of the American Chemical Society, 2006, vol. 128, p. 2438-2443.

28.

Kapitán J., Baumruk V., Kopecký Jr. V., Pohl R., Bouř P.: Proline zwitterion dynamics in solution, glass, and crystalline state. Journal of the American Chemical Society, 2006, vol. 128, p. 13451-13462.

29.

Kapitán J., Baumruk V., Hulačová H., Maloň P.: Raman optical activity of the hinge peptide. Vibrational Spectroscopy, 2006, vol. 42, p. 88-92.

30.

Kopecký Jr. V., Baumruk V.: Structure of the ring in drop coating deposited proteins and its implication for Raman spectroscopy of biomolecules. Vibrational Spectroscopy, 2006, vol. 42, p. 184-187.

31.

Kapitán J., Baumruk V., Gut V., Hlaváček J., Dlouhá H., Urbanová M., Wünsch E., Maloň P.: Raman Optical Activity of the Central Part of Hinge Peptide. Collection of Czechoslovak Chemical Communications, 2005, vol. 70, p. 403-409.

32.

Hernández B., Baumruk V., Gouyette C., Ghomi M.: Thermal stability, structural features, and B-to-Z transition in DNA tetraloop hairpins as determined by optical spectroscopy in d(CG)3T4(CG)3 and d(CG)3A4(CG)3 oligodeoxynucleotides. Biopolymers, 2005, vol. 78, p. 213-34.

33.

Kopecký Jr. V., Ettrich R., Hofbauerová K., Baumruk V.: Vibrational spectroscopy and computer modeling of proteins: solving structure of alpha(1)-acid glycoprotein. Spectroscopy: An International Journal, 2004, vol. 18, p. 323-330.

34.

Kubala M., Teisinger J., Ettrich R., Hofbauerová K., Kopecký Jr. V., Baumruk V., Krumscheid R., Plášek J., Schoner W., Amler E.: Eight amino acids form the ATP recognition site of Na+/K+-ATPase. Biochemistry, 2003, vol. 42, p. 6446-6452.

35.

Mojzeš P., Kruglik S.G., Baumruk V., Turpin P.Y.: Interactions of Electronically Excited Copper(II)−Porphyrin with DNA: Resonance Raman Evidence for the Exciplex Formation with Adenine and Cytosine Residues. The Journal of Physical Chemistry, 2003, vol. 107, p. 7532-7535.

36.

Pavlíček J., Sopko B., Ettrich R., Kopecký Jr. V., Baumruk V., Man P., Havlíček V., Vrbacký M., Martínková L., Křen V., Pospíšil M., Bezouška K.: Molecular Characterization of Binding of Calcium and Carbohydrates by an Early Activation Antigen of Lymphocytes CD69. Biochemistry, 2003, vol. 42, p. 9295-9306.

37.

Fejfar A., Mates T., Fojtík P., Ledinský M., Luterová K., Stuchlíková H., Pelant I., Kočka J., Baumruk V., Macková A., Ito M., Ro K., Uyama H.: Structure and Properties of Silicon Thin Films Deposited at Low Substrate Temperatures. Japanese Journal of Applied Physics, 2003, vol. 42, p. L987-L989.

38.

Kopecký Jr. V., Ettrich R., Hofbauerová K., Baumruk V.: Structure of human α1-acid glycoprotein and its high-affinity binding site. Biochemical and Biophysical Research Communications, 2003, vol. 300, p. 41-46.

39.

Hernández B., Baumruk V., Leulliot N., Gouyette C., Huynh-Dinh T., Ghomi M.: Thermodynamic and structural features of ultrastable DNA and RNA hairpins. Journal of Molecular Structure, 2003, vol. 651-653, p. 67-74.

40.

Bouř P., Sychrovský V., Maloň P., Hanzlíková J., Baumruk V., Pospíšek J., Buděšínský M.: Conformation of the Dipeptide Cyclo(L-Pro-L-Pro) Monitored by the Nuclear Magnetic Resonance and Raman Optical Activity Spectra. Experimental and ab Initio Computational Study. The Journal of Physical Chemistry, 2002, vol. 106, p. 7321-7327.

41.

Mojzeš P., Praus P., Baumruk V., Turpin P.Y., Matousek P.: Structural features of two distinct molecular complexes of copper(II) cationic porphyrin and deoxyribonucleotides. Biopolymers, 2002, vol. 67, p. 278-281.

42.

Ettrich R., Brandt W., Kopecký Jr. V., Baumruk V., Hofbauerová K., Pavlíček J.: Study of Chaperone-Like Activity of Human Haptoglobin: Conformational Changes under Heat Shock Conditions and Localization of Interaction Sites. Biological Chemistry, 2002, vol. 383, p. 1667-1676.

43.

Baumruk V., Gouyette C., Huynh-Dinh T., Sun J.S., Ghomi M.: Comparison between CUUG and UUCG tetraloops: thermodynamic stability and structural features analyzed by UV absorption and vibrational spectroscopy. Nucleic Acids Research, 2001, vol. 29, p. 4089-4096.

44.

Bouř P., Kapitán J., Baumruk V.: Simulation of the Raman Optical Activity of l-Alanyl−l-Alanine. The Journal of Physical Chemistry, 2001, vol. 105, p. 6362-6368.

45.

Leulliot N., Baumruk V., Gouyette C., Huynh-Dinh T., Turpin P.Y., Ghomi M.: Aqueous phase structural features of GNRA tetraloops formed in short hairpins as evidenced by UV absorption and Raman spectroscopy. Vibrational Spectroscopy, 1999, vol. 19, p. 335-340.

46.

Leulliot N., Ghomi M., Jobic H., Bouloussa O., Baumruk V., Coulombeau C.: Ground State Properties of the Nucleic Acid Constituents Studied by Density Functional Calculations. 2. Comparison between Calculated and Experimental Vibrational Spectra of Uridine and Cytidine. The Journal of Physical Chemistry, 1999, vol. 103, p. 10934-10944.

47.

Hanzlíková J., Praus P., Baumruk V.: Raman optical activity spectrometer for peptide studies. Journal of Molecular Structure, 1999, vol. 480-481, p. 431-435.

48.

Leulliot N., Baumruk V., Abdelkafi M., Turpin P.Y., Namane A., Gouyette C., Huynh-Dinh T., Ghomi M.: Unusual nucleotide conformations in GNRA and UNCG type tetraloop hairpins: evidence from Raman markers assignments. Nucleic Acids Research, 1999, vol. 27, p. 1398-1404.

49.

Hudeček J., Baumruk V., Anzenbacher P., Munro A.W.: Catalytically Self-Sufficient P450 CYP102 (Cytochrome P450 BM-3): Resonance Raman Spectral Characterization of the Heme Domain and of the Holoenzyme. Biochemical and Biophysical Research Communications, 1998, vol. 243, p. 811-815.

50.

Hanzlíková J., Procházka M., Štěpánek J., Bok J., Baumruk V., Anzenbacher P.: Metalation of 5,10,15,20-tetrakis(1-methyl-4-pyridyl)porphyrin in Silver Colloids Studied via Time Dependence of Surface-Enhanced Resonance Raman Spectra. Journal of Raman Spectroscopy, 1998, vol. 29, p. 575-584.

51.

Štrajbl M., Baumruk V., Florián J.: Scaled Quantum Mechanical Force Fields and Vibrational Spectra of Nucleic Acid Constituents. 9. Tetrahydrofuran. The Journal of Physical Chemistry, 1998, vol. 102, p. 1314-1319.

52.

Abdelkafi M., Leulliot N., Baumruk V., Bednárová L., Turpin P.Y., Namane A., Gouyette C., Huynh-Dinh T., Ghomi M.: Structural Features of the UCCG and UGCG Tetraloops in Very Short Hairpins As Evidenced by Optical Spectroscopy. Biochemistry, 1998, vol. 37, p. 7878-7884.

53.

Abdelkafi M., Ghomi M., Turpin P.Y., Baumruk V., Hervé du Penhoat C., Lampire O., Bouchemal-Chibani N., Goyer P., Namane A., Gouyette C., Huynh-Dinh T., Bednárová L.: Common structural features of UUCG and UACG tetraloops in very short hairpins determined by UV absorption, Raman, IR and NMR spectroscopies. Journal of Biomolecular Structure & Dynamics, 1997, vol. 14, p. 579-593.

54.

Srnová I., Vlčková B., Baumruk V.: Enhanced raman spectra of 2,2′-bipyridine adsorbed on aggregated palladium colloidal particles. Journal of Molecular Structure, 1997, vol. 410-411, p. 201-203.

55.

Bouř P., Baumruk V., Hanzlíková J.: Measurement and Calculation of the Raman Optical Activity of α-Pinene and trans-Pinane. Collection of Czechoslovak Chemical Communications, 1997, vol. 62, p. 1384-1395.

56.

Procházka M., Hanzlíková J., Štěpánek J., Baumruk V.: Metalation of positively charged water soluble mesoporphyrins studied via time-resolved SERRS spectroscopy. Journal of Molecular Structure, 1997, vol. 410-411, p. 77-79.

57.

Aamouche A., Ghomi M., Grajcar L., Baron M.H., Romain F., Baumruk V., Štěpánek J., Coulombeau C., Jobic H., Berthier G.: Neutron Inelastic Scattering, Optical Spectroscopies and Scaled Quantum Mechanical Force Fields for Analyzing the Vibrational Dynamics of Pyrimidine Nucleic Acid Bases: 3. Cytosine. The Journal of Physical Chemistry, 1997, vol. 101, p. 10063-10074.

58.

Vlčková B., Solecká-Čermáková K., Matějka P., Baumruk V.: SERS Spectroscopy with Ag Colloids. Journal of Molecular Structure, 1997, vol. 408-409, p. 149-154.

59.

Abdelkafi M., Leulliot N., Ghomi M., Hervé du Penhoat C., Namane A., Gouyette C., Huynh-Dinh T., Baumruk V., Turpin P.Y.: UNCG tetraloops in short oligoribonucleotides reveal high thermodynamic stability and unusual structural properties in aqueous phase as confirmed by optical and NMR spectroscopies. Journal of Molecular Structure, 1997, vol. 408-409, p. 241-245.

60.

Štrajbl M., Baumruk V., Florián J., Bednárová L., Rosenberg I., Štěpánek J.: Vibrational spectra and quantum mechanical force fields of modified oligonucleotide linkages: 1. methyl methoxymethanphosphonate. Journal of Molecular Structure, 1997, vol. 415, p. 161-177.

61.

Aamouche A., Ghomi M., Coulombeau C., Jobic H., Grajcar L., Baron M.H., Baumruk V., Turpin P.Y., Henriet C., Berthier G.: Article Neutron Inelastic Scattering, Optical Spectroscopies and Scaled Quantum Mechanical Force Fields for Analyzing the Vibrational Dynamics of Pyrimidine Nucleic Acid Bases. 1. Uracil. The Journal of Physical Chemistry, 1996, vol. 100, p. 5224-5234.

62.

Florián J., Baumruk V., Štrajbl M., Bednárová L., Štěpánek J.: IR and Raman Spectra, Conformational Flexibility, and Scaled Quantum Mechanical Force Fields of Sodium Dimethyl Phosphate and Dimethyl Phosphate Anion. The Journal of Physical Chemistry, 1996, vol. 100, p. 1559-1568.

63.

Florián J., Baumruk V., Leszczynski J.: IR and Raman Spectra, Tautomeric Stabilities, and Scaled Quantum Mechanical Force Fields of Protonated Cytosine. The Journal of Physical Chemistry, 1996, vol. 100, p. 5578-5589.

64.

Baumruk V., Pančoška P., Keiderling T.A.: Predictions of Secondary Structure using Statistical Analyses of Electronic and Vibrational Circular Dichroism and Fourier Transform Infrared Spectra of Proteins in H2O. Journal of Molecular Biology, 1996, vol. 259, p. 774-791.

65.

Pančoška P., Fabián H., Yoder G., Baumruk V., Keiderling T.A.: Protein Structural Segments and Their Interconnections Derived from Optical Spectra. Thermal Unfolding of Ribonuclease T1 as an Example. Biochemistry, 1996, vol. 35, p. 13094-13106.

66.

Baumruk V., Huo D.F., Dukor R.K., Keiderling T.A., Leliévre D., Brack A.: Conformational Study of Sequential Lys and Leu Based Polymers and Oligomers using Vibrational and Electronic Circular Dichroism Spectra. Biopolymers, 1994, vol. 34, p. 1115-1121.

67.

Čermáková K., Šesták O., Matějka P., Baumruk V., Vlčková B.: Surface-Enhanced Raman Scattering (SERS) Spectroscopy with Borohydride-Reduced Silver Colloids: Controlling Adsorption of the Scattering Species by Surface Potential of Silver Colloid. Collection of Czechoslovak Chemical Communications, 1993, vol. 58, p. 2682-2694.

68.

Vlčková B., Matějka P., Šimonová J., Čermáková K., Pančoška P., Baumruk V.: Surface-Enhanced Resonance Raman Spectra of Free Base 5,10,15,20-Tetrakis(4-carboxyphenyl)porphyrin and its Silver Complex in Systems with Silver Colloid: Direct Adsorption in Comparison to Adsorption via Molecular Spacer. Journal of Physical Chemistry, 1993, vol. 97, p. 9719-9729.

69.

Baumruk V., Keiderling T.A.: Vibrational Circular Dichroism of Proteins in H2O Solution. Journal of the American Chemical Society, 1993, vol. 115, p. 6939-6942.

70.

Anzenbacher P., Mojzeš P., Baumruk V., Amler E.: Changes in Na+,K+-ATPase Structure Induced by Cation Binding: Approach by Raman Spectroscopy. FEBS Letters, 1992, vol. 312, p. 80-82.

71.

Vlčková B., Baumruk V., Mosinger J.: Resonance Raman Spectra of Bis(2, 4-pentanedithionate) Pd(II) Complex. Journal of Molecular Structure, 1992, vol. 265, p. 9-16.

72.

Florián J., Baumruk V.: Scaled Quantum Mechanical Force Fields and Vibrational Spectra of Solid State Nucleic Acid Constituents IV: N7-protonated Guanine. Journal of Physical Chemistry, 1992, vol. 96, p. 9283-9287.

73.

Matějka P., Vlčková B., Vohlídal J., Pančoška P., Baumruk V.: The Role of Triton X-100 as an Adsorbate and a Molecular Spacer on the Surface Silver Colloid: A Surface-Enhanced Raman Scattering Study. Journal of Physical Chemistry, 1992, vol. 96, p. 1361-1366.

74.

Vlčková B., Matějka P., Pančoška P., Baumruk V., Král V.: Surface-Enhanced Raman Spectra of 5,10,15,20-Tetrakis (4-carboxyphenyl)porphyrin/Silver Colloid System: What Information Do We Obtain?. Inorganic Chemistry, 1991, vol. 30, p. 4103-4105.

Konferenční příspěvky

1.

Kopecký Jr. V., Pazderka T., Hofbauerová K., Baumruk V.: 2D Correlation Analysis of Lysozyme Fibrillation Studied by Raman Optical Activity and Raman Spectroscopy. 6th International Congress on Microscopy & Spectroscopy, Oludeniz, Turkey, May 12–18, 2019, Editors: A. Yavuz Oral et al., 2019, p. 38 (Zvaná přednáška - Kopecký Jr. V.).

2.

Kopecký Jr. V., Hofbauerová K., Baumruk V.: Carbohydrate antennas of glycoproteins investigated by Raman spectroscopy and Raman optical activity. 26th International Conference on Raman Spectroscopy (ICORS 2018), Jeju, Korea, August 26–31, 2018, Editors: D. Kim & Y. M. Jung , 2018, p. 460-461 (Zvaná přednáška - Kopecký Jr. V.).

3.

Kopecký Jr. V., Mojzeš P., Hofbauerová K., Baumruk V.: 5'-GMP quartets and G-quadruplexes in human telomere investigated by Raman optical activity (ROA). 15th International Conference on Chiroptical Spectroscopy, Sapporo, Japan, August 30 – September 3, 2015, Editors: K. Monde, R. Kuroda, 2015, p. 139 (Poster - Kopecký Jr. V.).

4.

Kopecký Jr. V., Hofbauerová K., Baumruk V.: Carbohydrate part of glycoproteins studied by vibrational circular dichroism (VCD). 15th International Conference on Chiroptical Spectroscopy, Sapporo, Japan, August 30 – September 3, 2015, Editors: K. Monde, R. Kuroda , 2015, p. 127 (Poster - Hofbauerová K.).

5.

Kopecký Jr. V., Hofbauerová K., Baumruk V.: Carbohydrate antennas of glycoproteins investigated by Raman spectroscopy and Raman optical activity. 7th International Conference on Advanced Vibrational Spectroscopy, Kobe, Japan, August 25–30, 2013, Editors: Y. Ozaki , 2013, p. P238 (Poster - Kopecký Jr. V.).

6.

Profant V., Keiderling T.A., Bouř P., Baumruk V.: Detection of polyproline I conformation by ROA. The 15th European Conference on the Spectroscopy of Biological Molecules - ECSBM 15, United Kingdom, Oxford, October 25 - 30, 2013 (Přednáška - Profant V.).

7.

Profant V., Keiderling T.A., Bouř P., Baumruk V.: Detection of polyproline I conformation by ROA. The 14th International Conference on Chiroptical Spectroscopy - CD 2013, Nashville, USA, June 9 – 13, 2013 (Přednáška - Profant V.).

8.

Pazderková M., Profant V., Dlouhá H., Šebestík J., Bednárová L., Baumruk V., Maloň P.: Optical activity of the chiral bicyclic spirodilactam. The 14th International Conference on Chiroptical Spectroscopy - CD 2013, Nashville, USA, June 9 - 13, 2013 (Poster - Pazderková M.).

9.

Pazderka T., Hofbauerová K., Bednárová L., Baumruk V., Kopecký Jr. V.: Structure and dynamics of human haptoglobin phenotypes. 14th International Conference on Chiroptical Spectroscopy, Nashville, USA, June 9-13, 2013, Editors: P. L. Polavarapu, 2013, p. P46 (Poster - Pazderka T.).

10.

Pazderka T., Hofbauerová K., Baumruk V., Kopecký Jr. V.: Structure and dynamics of human haptoglobin phenotypes by menas of vibrational spectrscopy. 7th International Conference on Advanced Vibrational Spectroscopy, Kobe, Japan, August 25–30, 2013, Editors: Y. Ozaki , 2013, p. P167 (Poster - Pazderka T.).

11.

Hudecová J., Profant V., Novotná P., Baumruk V., Urbanová M., Bouř P.: The CH Stretching Region: Computational Modeling of Vibrational Optical Activity. Modeling Interactions in Biomolecules VI - MIB 2013, Mariánské lázně, Czech Republic, September 16 – 19, 2013 (Poster - Hudecová J.).

12.

Pazderka T., Hofbauerová K., Baumruk V., Kopecký Jr. V.: Comparison of structure of human haptoglobin phenotypes investigated by Raman spectroscopy and Raman optical activity. 23th International Conference on Raman Spectroscopy, Bangalore, India, August 12–17, 2012, Editors: S. Umapathy , 2012, p. 106 (Poster - Pazderka T.).

13.

Pazderka T., Kopecký Jr. V., Hofbauerová K., Baumruk V.: Different kinds of protein oligomerization investigated by Raman optical activity. Workshop CECAM 2012 – Vibrational Optical Activity: Interplay of Theory and Experiment, Pisa, Italy, September 23–27, 2012, Editors: C. Cappelli, K. Ruud, M. Pecul-Kudelska, R. Dukor, 2012, p. 53 (Poster - Pazderka T.).

14.

Baumruk V., Pazderková M., Profant V., Bednárová L., Maloň P.: Raman optical activity of amide and disulfide groups in peptides and model systems. International Conference on Vibrational Optical Activity-VOA3, Pisa, Italy, September 23 – 27, 2012 (Přednáška - Baumruk V.).

15.

Profant V., Johannessen C., Sattelle B., Blanch E.W., Bouř P., Baumruk V.: ROA Study of Chondroitin Sulphate and its Building Blocks. 23rd International Conference on Raman Spectroscopy, Bangalore, India, August 12 – 17, 2012 (Poster - Profant V.).

16.

Profant V., Zíma V., Johannessen C., Sattelle B., Blanch E.W., Bouř P., Baumruk V.: ROA Study of Chondroitin Sulphate and its Building Blocks. International Conference on Vibrational Optical Activity-VOA3, Pisa, Italy, September 23 – 27, 2012 (Přednáška - Profant V.).

17.

Profant V., Johannessen C., Blanch E.W., Bouř P., Baumruk V.: ROA Study of Chondroitin Sulphate and its Building Blocks. Xth Discussions in Structural Molecular Biology, Nove Hrady, Czech Republic, March 22 – 24, 2012 (Poster - Profant V.).

18.

Pazderková M., Profant V., Urbanová M., Bednárová L., Baumruk V., Maloň P.: Vibrational optical activity of rigid spirodilactams containing two non-planar amide groups. International Conference on Vibrational Optical Activity-VOA3, Pisa, Italy, September 23 – 27, 2012 (Poster - Pazderková M.).

19.

Hudecová J., Profant V., Urbanová M., Novotná P., Baumruk V., Bouř P.: Vibrational Optical Activity Spectra of Organic Compounds in the C-H Stretching Region. 23rd International Conference on Raman Spectroscopy, Bangalore, India, August 12 – 17, 2012 (Poster - Baumruk V.).

20.

Hudecová J., Profant V., Urbanová M., Novotná P., Baumruk V., Bouř P.: Vibrational Optical Activity Spectra of Organic Compounds in the C-H Stretching Region. Modeling and Design of Molecular Materials 2012, Wroclaw, Poland, September 10 – 14, 2012 (Poster - Hudecová J.).

21.

Pazderka T., Kopecký Jr. V., Hofbauerová K., Baumruk V.: 2D correlation analysis of lysozyme fibrillation studied by Raman optical activity and Raman spectroscopy. 13th International Conference on Chiroptical Spectroscopy – CD 2011, Oxford, United Kingdom, July 24–28, 2011, Editors: G. Siligardi, R. Hussain, L. Barron, G. Tranter , 2011, p. 34 (Přednáška - Kopecký Jr. V.).

22.

Pazderka T., Kopecký Jr. V., Hofbauerová K., Baumruk V.: 2D correlation analysis of lysozyme fibrillation studied by Raman optical activity and Raman spectroscopy. Sixth International Conference on Advanced Vibrational Spectroscopy (ICAVS-6), Sonoma County, California, 12-17 June, 2011 (Poster - Pazderka T.).

23.

Profant V., Bouř P., Baumruk V.: Conformational Study of Proline Oligomers: Experiment and Simulations. The 13th International Conference on Chiroptical Spectroscopy – CD2011, Oxford, UK, July 24 – 28, Editors: Siligardi G., Hussain R., Barron L., Tranter G., 2011, p. 49 (Přednáška - Profant V.).

24.

Profant V., Bouř P., Baumruk V.: Conformational Study of Proline Oligomers: Experiment and Simulations. 9th Discussions in Structural Molecular Biology, Nové Hrady, Czech Republic, March 24 – 26, Editors: Schneider B., 2011, p. 10 (Přednáška - Profant V.).

25.

Profant V., Bouř P., Baumruk V.: Folding Studies of Proline Oligomers by the Raman Optical Activity. The 14th European Congress on the Spectroscopy of Biological Molecules, Coimbra, Portugal, August 29 - September 3, Editors: Marques M.P., de Carvalho L.B., 2011, p. 1 (Poster - Profant V.).

26.

Kopecký Jr. V., Pazderka T., Hofbauerová K., Baumruk V.: Lysozyme fibrillation probed by 2D correlation analysis of Raman and Raman optical activity spectra. 1st Visegrad Symposium on Structural Systems Biology, Nové Hrady, Czech Republic, 29th November-2nd December 2011, Editors: R. Ettrich, B. Minofar, A. Zupčanová, D. Řeha, 2011, p. 18 (Zvaná přednáška - Kopecký Jr. V.).

27.

Pazderka T., Kopecký Jr. V., Hofbauerová K., Baumruk V.: Novel approach to protein structure determination by optical spectroscopies. 13th International Conference on Chiroptical Spectroscopy – CD 2011, Oxford, United Kingdom, July 24–28, 2011, Editors: G. Siligardi, R. Hussain, L. Barron, G. Tranter, 2011, p. 112.

28.

Pazderková M., Profant V., Maloň P., Baumruk V.: ROA measurement in the extended spectral region. The 13th International Conference on Chiroptical Spectroscopy – CD2011, Oxford, UK, July 24 – 28, Editors: Siligardi G., Hussain R., Barron L., Tranter G., 2011, p. 71 (Poster - Baumruk V.).

29.

Pazderková M., Profant V., Bednárová L., Urbanová M., Baumruk V., Maloň P.: VCD and ROA analysis of rigid chiral spirocyclic dilactams. The 13th International Conference on Chiroptical Spectroscopy – CD2011, Oxford, UK, July 24 – 28, Editors: Siligardi G., Hussain R., Barron L., Tranter G., 2011, p. 102 (Poster - Maloň P.).

30.

Pazderková M., Profant V., Šebestík J., Hodačová J., Urbanová M., Bednárová L., Baumruk V., Maloň P.: Vibrational Optical Activity of Two Nonplanar Amide Groups Interacting in Rigid Polycyclic Environment. The 13th International Conference on Chiroptical Spectroscopy - CD2011, Oxford, UK, 24-28 July, 2011, p. 65 (Přednáška - Pazderková M.).

31.

Profant V., Pazderková M., Bednárová L., Maloň P., Baumruk V.: VOA calculation of medium-sized rigid spirodilactams: Effect of basis set and computational methodology. The 13th International Conference on Chiroptical Spectroscopy – CD2011, Oxford, UK, July 24 – 28, Editors: Siligardi G., Hussain R., Barron L., Tranter G., 2011, p. 113 (Poster - Profant V.).

32.

Pazderka T., Kopecký Jr. V., Hofbauerová K., Baumruk V.: 2D correlation analysis of lysozyme fibrillation studied by Raman spectroscopy and Raman optical activity. 22nd International Symposium on Chirality (ISCD-22) – Program and Abstracts, Sapporo, Japan, July 12–15, Editors: E. Yashima, 2010, p. 242.

33.

Kopecký Jr. V., Hofbauerová K., Baumruk V.: Carbohydrate part of intact glycoproteins studied by Raman optical activity (ROA). 22nd International Symposium on Chirality (ISCD-22) – Program and Abstracts, Sapporo, Japan, July 12–15, Editors: E. Yashima, 2010, p. 241.

34.

Profant V., Bouř P., Baumruk V.: Dependence of polyproline ROA on the peptide length. 3th Annual meeting in Computational Chemistry, Norwegian Chemical Society – Book of Abstracts, Trondheim, Norway, November 22 – 23, Editors: Åstrand P.-O., 2010, p. 36 (Přednáška - Profant V.).

35.

Baumruk V., Bednárová L., Kubáňová M., Maloň P.: Disuphide chromofore and its optical activity. 22nd International Symposium on Chirality (ISCD-22) - Program and Abstracts, Sapporo, Japan, July 12–15, Editors: E. Yashima, 2010, p. 165 (Přednáška - Baumruk V.).

36.

Profant V., Bouř P., Baumruk V.: Formation of PPII helical conformation studied by Raman optical activity. 30th European Congress on Molecular Spectroscopy – Book of Abstracts, Florence, Italy, August 29 - September 3, Editors: Becucci M., Gellini C., Schettino V., 2010, p. 72 (Přednáška - Profant V.).

37.

Pazderka T., Kopecký Jr. V., Hofbauerová K., Baumruk V.: Raman and infrared spectroscopy of amino acids and its implication for improvement of the protein secondary structure determination. 30th European Congress on Molecular Spectroscopy – Book of Abstracts, Florence, Italy, 29 August – 3 September, Editors: M. Becucci, C. Gellini, V. Schettino, 2010, p. 132.

38.

Profant V., Šafařík M., Bouř P., Baumruk V.: Raman optical activity study of poly-L-proline chains of various lengths. Quantum Chemical Winter School: Response Properties of Molecular Materials, Chamonix Mont-Blanc, France, January 25 - 29, Editors: Ruud K., Norman P., Saue T., 2010, p. 10 (Poster - Profant V.).

39.

Profant V., Šafařík M., Bouř P., Baumruk V.: Raman optical activity study of poly-L-proline chains of various lengths. 8th Discussions in Structural Molecular Biology, Nove Hrady, Czech Republic, March 21 - 22, Editors: Schneider B., 2010, p. 10 (Poster - Profant V.).

40.

Pazderka T., Kopecký Jr. V., Hofbauerová K., Baumruk V.: Two-dimensional Raman and Raman optical activity correlation and factor analysis of lysozyme fibrillation. 30th European Congress on Molecular Spectroscopy – Book of Abstracts, Florence, Italy, 29 August – 3 September, Editors: M. Becucci, C. Gellini, V. Schettino, 2010, p. 84 (Přednáška - Kopecký Jr. V.).

41.

Pazderka T., Kopecký Jr. V., Hofbauerová K., Baumruk V.: Two-dimensional Raman and Raman optical activity correlation and factor analysis of lysozyme fibrillation. 8th Discussions in Structural Molecular Biology – Materials Structure vol. 17, Nové Hrady, Czech Republic, March 18–20, Editors: B. Schneider, I. Kutá-Smatanová, R. Kužel, D. Štys, R. Ettrich, J. Hašek, 2010, p. B47.

42.

Profant V., Šafařík M., Bouř P., Baumruk V.: Raman optical activity study of poly-L-proline chains of various lengths. 13th European Conference on the Spectroscopy of Biological Molecules – Book of Abstracts, Palermo, Italy, August 28 – September 2, Editors: Cupane A., 2009, p. 98 (Poster - Profant V.).

43.

Pazderka T., Kopecký Jr. V., Hofbauerová K., Baumruk V.: Two-dimensional Raman and raman optical activity correlation and factor analysis of lysozyme fibrillation. XIII European Conference on the Spectroscopy of Biological Molecules – Book of Abstracts, Palermo, Italy, August 28 – September 2, Editors: A. Cupane, 2009, p. PB102.

44.

Kapitán J., Kopecký Jr. V., Bok J., Praus P., Baumruk V.: Prague ROA spectrometer and new approaches to experimental data processing. 21st International Conference on Raman Spectroscopy – Book of Abstracts, ISBN 978-1-906715-00-7, London, Great Britain, August 17–22, Editors: R. Withnall, B. Z. Chowdhry, M Publications LLP, 2008, p. 566-567.

45.

Baumruk V., Kapitán J., Hrudíková J., Kopecký Jr. V., Maloň P., Bouř P.: Raman optical activity of biomolecules: from simple models to complex systems. 21st International Conference on Raman Spectroscopy – Book of Abstracts, ISBN 978-1-906715-00-7, London, Great Britain, August 17–22, Editors: R. Withnall, B. Z. Chowdhry, M Publications LLP, 2008, p. 561-562.

46.

Kopecký Jr. V., Pazderka T., Baumruk V.: Raman optical activity of carbohydrates and glycoproteins. Cukrblik 2007 – Current Chemistry and Biochemistry of Saccharides, Prague, Czech Republic, April 20, Editors: J. Moravcová, V. Křen, 2007 (Přednáška - Kopecký Jr. V.).