Articles
24.
Kopecký Jr. V., Ettrich R., Hofbauerová K., Baumruk V.: Vibrational spectroscopy and computer modeling of proteins: solving structure of alpha(1)-acid glycoprotein. Spectroscopy: An International Journal, 2004, vol. 18, p. 323-330.
Conference proceedings
1.
Kopecký Jr. V., Pazderka T., Hofbauerová K., Baumruk V.: 2D Correlation Analysis of Lysozyme Fibrillation Studied by Raman Optical Activity and Raman Spectroscopy. 6th International Congress on Microscopy & Spectroscopy, Oludeniz, Turkey, May 12–18, 2019, Editors: A. Yavuz Oral et al., 2019, p. 38 (Invited lecture - Kopecký Jr. V.).
2.
Kopecký Jr. V., Hofbauerová K., Baumruk V.: Carbohydrate antennas of glycoproteins investigated by Raman spectroscopy and Raman optical activity. 26th International Conference on Raman Spectroscopy (ICORS 2018), Jeju, Korea, August 26–31, 2018, Editors: D. Kim & Y. M. Jung , 2018, p. 460-461 (Invited lecture - Kopecký Jr. V.).
3.
Hofbauerová K., Kopecký Jr. V., Kočišová E., Procházka M., Štěpánek J.: General Applicability of Drop-Coating Deposition Raman Spectroscopy. 5th International Congress on Microscopy & Spectroscopy, Oludeniz, Turkey, April 24–30, 2018, Editors: A. Yavuz Oral et al., 2018, p. 85 (Poster - Hofbauerová K.).
4.
Hofbauerová K., Kopecký Jr. V., Barvík Jr. I., Klener J., Teisinger J.: Study of new binding sites for calmodulin on transient receptor potential channels of melastatin TRPM5, TRPM6, and TRPM7 N-termini. 26th International Conference on Raman Spectroscopy (ICORS 2018), Jeju, Korea, August 26–31, 2018, Editors: D. Kim & Y. M. Jung , 2018, p. 1153-1154 (Poster - Hofbauerová K.).
5.
Mojzeš P., Římal V., Mudroňová K., Klener J., Hofbauerová K., Kopecký Jr. V., Bednárová L.: Interquadruplex transitions of human telomeric sequences in K+ solutions under molecular crowding conditions and sub-melting temperatures. 6th International Meeting on Quadruplex Nucleic Acids: G4thering, Prague, Czech Republic, 31 May - 3 June 2017, 2017, p. 93 (Poster - Mojzeš P.).
6.
Boušová K., Bednárová L., Hofbauerová K., Obšilová V., Vondrášek J.: Biophysical characterization of the recombinant fusion two-domain proteins. 4th Prague Protein Spring, Prague, May 5-8, 2016 (Poster - Boušová K.).
7.
Mudroňová K., Klener J., Mojzeš P., Hofbauerová K., Kopecký Jr. V., Bednárová L.: Interquadruplex transitions of human telomeric sequences in K+ solutions under molecular crowding conditions and sub-melting temperatures. 33th European Congress on Molecular Spectroscopy - Book of Abstracts, Szeged, Hungary, 30 July - 4 August 2016, Editors: I. Pálinkó, 2016, p. 163 (Poster - Mudroňová K.).
8.
Kopecký Jr. V., Mojzeš P., Hofbauerová K., Baumruk V.: 5'-GMP quartets and G-quadruplexes in human telomere investigated by Raman optical activity (ROA). 15th International Conference on Chiroptical Spectroscopy, Sapporo, Japan, August 30 – September 3, 2015, Editors: K. Monde, R. Kuroda, 2015, p. 139 (Poster - Kopecký Jr. V.).
9.
Kopecký Jr. V., Hofbauerová K., Baumruk V.: Carbohydrate part of glycoproteins studied by vibrational circular dichroism (VCD). 15th International Conference on Chiroptical Spectroscopy, Sapporo, Japan, August 30 – September 3, 2015, Editors: K. Monde, R. Kuroda , 2015, p. 127 (Poster - Hofbauerová K.).
10.
Kopecký Jr. V., Hofbauerová K., Kohoutová J., Kříž M., Klener J., Ettrich R., Štěpánek J.: Application of drop coating deposition Raman spectrscopy in protein structural studies. 7th International Conference on Advanced Vibrational Spectroscopy, Kobe, Japan, August 25–30, 2013, Editors: Y. Ozaki , 2013, p. P169 (Poster - Hofbauerová K.).
11.
Kopecký Jr. V., Hofbauerová K., Baumruk V.: Carbohydrate antennas of glycoproteins investigated by Raman spectroscopy and Raman optical activity. 7th International Conference on Advanced Vibrational Spectroscopy, Kobe, Japan, August 25–30, 2013, Editors: Y. Ozaki , 2013, p. P238 (Poster - Kopecký Jr. V.).
12.
Pazderka T., Hofbauerová K., Bednárová L., Baumruk V., Kopecký Jr. V.: Structure and dynamics of human haptoglobin phenotypes. 14th International Conference on Chiroptical Spectroscopy, Nashville, USA, June 9-13, 2013, Editors: P. L. Polavarapu, 2013, p. P46 (Poster - Pazderka T.).
13.
Pazderka T., Hofbauerová K., Baumruk V., Kopecký Jr. V.: Structure and dynamics of human haptoglobin phenotypes by menas of vibrational spectrscopy. 7th International Conference on Advanced Vibrational Spectroscopy, Kobe, Japan, August 25–30, 2013, Editors: Y. Ozaki , 2013, p. P167 (Poster - Pazderka T.).
14.
Pazderka T., Hofbauerová K., Kopecký Jr. V.: Comparison of structure and dynamics of human haptoglobin phenotypes monitored by vibrational spectroscopy. 31st European Congress on Molecular Spectroscopy, Cluj-Napoca, Romania, August 26–31, 2012, Editors: K. Nagy-Póra, V. Chiş, S. Aştilean, O. Cozar, 2012, p. 219 (Poster - Pazderka T.).
15.
Pazderka T., Hofbauerová K., Baumruk V., Kopecký Jr. V.: Comparison of structure of human haptoglobin phenotypes investigated by Raman spectroscopy and Raman optical activity. 23th International Conference on Raman Spectroscopy, Bangalore, India, August 12–17, 2012, Editors: S. Umapathy , 2012, p. 106 (Poster - Pazderka T.).
16.
Pazderka T., Kopecký Jr. V., Hofbauerová K., Baumruk V.: Different kinds of protein oligomerization investigated by Raman optical activity. Workshop CECAM 2012 – Vibrational Optical Activity: Interplay of Theory and Experiment, Pisa, Italy, September 23–27, 2012, Editors: C. Cappelli, K. Ruud, M. Pecul-Kudelska, R. Dukor, 2012, p. 53 (Poster - Pazderka T.).
17.
Klener J., Hofbauerová K., Bartoš A., Řípová D., Kopecký Jr. V.: Drop coating deposition Raman spectroscopy as the diagnostic tool of Alzheimer disease. 23th International Conference on Raman Spectroscopy, Bangalore, India, August 12–17, Editors: S. Umapathy , 2012, p. 50 (Poster - Klener J.).
18.
Pazderka T., Kopecký Jr. V., Hofbauerová K., Baumruk V.: 2D correlation analysis of lysozyme fibrillation studied by Raman optical activity and Raman spectroscopy. Sixth International Conference on Advanced Vibrational Spectroscopy (ICAVS-6), Sonoma County, California, 12-17 June, 2011 (Poster - Pazderka T.).
19.
Pazderka T., Kopecký Jr. V., Hofbauerová K., Baumruk V.: 2D correlation analysis of lysozyme fibrillation studied by Raman optical activity and Raman spectroscopy. 13th International Conference on Chiroptical Spectroscopy – CD 2011, Oxford, United Kingdom, July 24–28, 2011, Editors: G. Siligardi, R. Hussain, L. Barron, G. Tranter , 2011, p. 34 (Lecture - Kopecký Jr. V.).
20.
Kopecký Jr. V., Pazderka T., Hofbauerová K., Baumruk V.: Lysozyme fibrillation probed by 2D correlation analysis of Raman and Raman optical activity spectra. 1st Visegrad Symposium on Structural Systems Biology, Nové Hrady, Czech Republic, 29th November-2nd December 2011, Editors: R. Ettrich, B. Minofar, A. Zupčanová, D. Řeha, 2011, p. 18 (Invited lecture - Kopecký Jr. V.).
21.
Pazderka T., Kopecký Jr. V., Hofbauerová K., Baumruk V.: Novel approach to protein structure determination by optical spectroscopies. 13th International Conference on Chiroptical Spectroscopy – CD 2011, Oxford, United Kingdom, July 24–28, 2011, Editors: G. Siligardi, R. Hussain, L. Barron, G. Tranter, 2011, p. 112.
22.
Pazderka T., Kopecký Jr. V., Hofbauerová K., Baumruk V.: 2D correlation analysis of lysozyme fibrillation studied by Raman spectroscopy and Raman optical activity. 22nd International Symposium on Chirality (ISCD-22) – Program and Abstracts, Sapporo, Japan, July 12–15, Editors: E. Yashima, 2010, p. 242.
23.
Bednárová L., Maloň P., Dlouhá H., Kubáňová M., Mojzeš P., Kočišová E., Hofbauerová K., Kopecký Jr. V.: Antibacterial peptides in interaction with model membranes studied by various spectroscopic methods. 30th European Congress on Molecular Spectroscopy – Book of Abstracts, Florence, Italy, 29 August – 3 September, Editors: M. Becucci, C. Gellini, V. Schettino, 2010, p. 95.
24.
Bednárová L., Maloň P., Dlouhá H., Kočišová E., Hofbauerová K., Kopecký Jr. V.: Antibacterial peptides in interaction with model membranes studied by various spectroscopic methods. 8th Discussions in Structural Molecular Biology – Materials Structure vol. 17, Nové Hrady, Czech Republic, March 18–20, Editors: . Schneider, I. Kutá-Smatanová, R. Kužel, D. Štys, R. Ettrich, J. Hašek, 2010, p. B32.
25.
Kopecký Jr. V., Hofbauerová K., Kohoutová J., Štěpánek J., Ettrich R.: Can drop coating deposition Raman spectroscopy distinguish shortcomings or inaccuracies in protein crystals?. 30th European Congress on Molecular Spectroscopy – Book of Abstracts, Florence, Italy, 29 August – 3 September, Editors: M. Becucci, C. Gellini, V. Schettino, 2010, p. 289 (Lecture - Hofbauerová K.).
26.
Kopecký Jr. V., Hofbauerová K., Baumruk V.: Carbohydrate part of intact glycoproteins studied by Raman optical activity (ROA). 22nd International Symposium on Chirality (ISCD-22) – Program and Abstracts, Sapporo, Japan, July 12–15, Editors: E. Yashima, 2010, p. 241.
27.
Krištofiková Z., Kopecký Jr. V., Hofbauerová K., Kříž Z., Řípová D.: Interactions of amyloid beta peptides and cerebrosterol are not fully stereospecific. 7th European Neuroscience – FENS Forum 2010 – Book of Abstracts vol. 5, Amsterdam, The Netherlands, July 3–7, 2010, p. 07850.
28.
Pazderka T., Kopecký Jr. V., Hofbauerová K., Baumruk V.: Raman and infrared spectroscopy of amino acids and its implication for improvement of the protein secondary structure determination. 30th European Congress on Molecular Spectroscopy – Book of Abstracts, Florence, Italy, 29 August – 3 September, Editors: M. Becucci, C. Gellini, V. Schettino, 2010, p. 132.
29.
Kopecký Jr. V., Hofbauerová K., Kohoutová J., Lapkouski M., Sovová Ž., Kutá-Smatanová I., Ettrich R.: Structure differences between protein crystals and solution structures monitored by Raman spectroscopy – case study of PsbP protein. 8th Discussions in Structural Molecular Biology – Materials Structure vol. 17, Nové Hrady, Czech Republic, March 18–20, Editors: . Schneider, I. Kutá-Smatanová, R. Kužel, D. Štys, R. Ettrich, J. Hašek , 2010, p. B6 (Lecture - Kopecký Jr. V.).
30.
Pazderka T., Kopecký Jr. V., Hofbauerová K., Baumruk V.: Two-dimensional Raman and Raman optical activity correlation and factor analysis of lysozyme fibrillation. 30th European Congress on Molecular Spectroscopy – Book of Abstracts, Florence, Italy, 29 August – 3 September, Editors: M. Becucci, C. Gellini, V. Schettino, 2010, p. 84 (Lecture - Kopecký Jr. V.).
31.
Pazderka T., Kopecký Jr. V., Hofbauerová K., Baumruk V.: Two-dimensional Raman and Raman optical activity correlation and factor analysis of lysozyme fibrillation. 8th Discussions in Structural Molecular Biology – Materials Structure vol. 17, Nové Hrady, Czech Republic, March 18–20, Editors: B. Schneider, I. Kutá-Smatanová, R. Kužel, D. Štys, R. Ettrich, J. Hašek, 2010, p. B47.
32.
Kohoutová J., Kopecký Jr. V., Lapkouski M., Hofbauerová K., Sovová Ž., González-Pérezc S., Kutá-Smatanová I., Revuelta J.L., Arellano J.B., Ettrich R.: Structural analysis of the extrinsic PsbP protein of PSII from Spinacea oleracea and its interaction with the oxygen-evolving complex. 34th FEBS Congress – The FEBS Journal vol. 276, Prague, Czech Republic, July 4–9, 2009, p. 146-147.
33.
Kohoutová J., Kopecký Jr. V., Lapkouski M., Hofbauerová K., Sovová Ž., González-Pérezc S., Kutá-Smatanová I., Revuelta J.L., Arellano J.B., Ettrich R.: Structural analysis of the extrinsic PsbP protein of PSII from Spinacea oleracea by X-ray crystallography, Raman spectroscopy and bioinformatics. 7th Discussions in Structural Molecular Biology – Materials Structure vol. 16, Nové Hrady, Czech Republic, March 12–14, Editors: B. Schneider, I. Kutá-Smatanová, R. Kužel, D. Štys, J. Hašek, 2009, p. B32.
34.
Kopecký Jr. V., Hofbauerová K., Kohoutová J., Štěpánek J., Ettrich R.: Structure differences between protein crystals and solution structures monitored by Raman spectrscopy. XIII European Conference on the Spectroscopy of Biological Molecules – Book of Abstracts, Palermo, Italy, August 28 – September 2, Editors: A. Cupane, 2009, p. PB102.
35.
Pazderka T., Kopecký Jr. V., Hofbauerová K., Baumruk V.: Two-dimensional Raman and raman optical activity correlation and factor analysis of lysozyme fibrillation. XIII European Conference on the Spectroscopy of Biological Molecules – Book of Abstracts, Palermo, Italy, August 28 – September 2, Editors: A. Cupane, 2009, p. PB102.