Publikace v časopisech
35.
Praus P., Kočišová E., Seksek O., Sureau F., Štěpánek J., Turpin P.Y.: Advanced microfluores cence methods in monitoring intracellular uptake of "antisense" oligonucleotides. Current Organic Chemistry, 2007, vol. 11, p. 515-527.
39.
Procházka V., Štěpánková H., Štěpánek J., Snezhko A., Chlan V., Kouřil K.: Exchange interactions in barium hexaferrite. Acta Physica Slovaca, 2006, vol. 56, p. 165-168.
41.
Štěpánková H., Englich J., Štěpánek J., Kohout J., Pfeffer M., Černá J., Chlan V., Procházka V., Bunyatova E.: Nuclear spin-lattice relaxations in ethanol with dissolved TEMPO radicals. Acta Physica Slovaca, 2006, vol. 56, p. 141-144.
42.
Němeček D., Kočišová E., Praus P., Štěpánek J.: Studium oligonukleotidů pokročilými technikami optické spektroskopie. Československý časopis pro fyziku, 2006, vol. 56, p. 319-326.
51.
Praus P., Sureau F., Kočišová E., Rosenberg I., Štěpánek J., Turpin P.Y.: A frequency domain phase/modulation technique for intracellular multicomponent fluorescence analysis: Technical approach and pharmacological applications. Spectroscopy: An International Journal, 2003, vol. 17, p. 429-434.
52.
Procházka M., Štěpánek J., Bok J.: Ag+ and Ag(0) coordination of porphyrins adsorbed on laser-ablated Ag colloids monitored by surface-enhanced resonance Raman scattering spectroscopy. Main Group Metal Chemistry, 2003, vol. 26, p. 317-321.
81.
Zachová J., Chmelová K., Kuželová K., Štěpánek J.: Pěstování monokrystalů komplexu 1–methylthyminu a 9–methyladeninu a studium jeho vibračních módů (Single crystal growth and vibrational study of 1–methylthymine and 9–methyladenine complex). Chem. listy, 1997, vol. 91, p. 680-681.
Konferenční příspěvky
1.
Hofbauerová K., Kopecký Jr. V., Kočišová E., Procházka M., Štěpánek J.: General Applicability of Drop-Coating Deposition Raman Spectroscopy. 5th International Congress on Microscopy & Spectroscopy, Oludeniz, Turkey, April 24–30, 2018, Editors: A. Yavuz Oral et al., 2018, p. 85 (Poster - Hofbauerová K.).
2.
Klener J., Štěpánek J.: UV Resonance Raman Study of Mg2+-induced formation of polyU·polyA·polyU triplexes. XXIV. International Conference on Raman Spectroscopy, Jena, Germany, August 10–15, Editors: Pop J., Deckert V., 2014, p. 979-980 (Poster - Klener J.).
3.
Kopecký Jr. V., Hofbauerová K., Kohoutová J., Kříž M., Klener J., Ettrich R., Štěpánek J.: Application of drop coating deposition Raman spectrscopy in protein structural studies. 7th International Conference on Advanced Vibrational Spectroscopy, Kobe, Japan, August 25–30, 2013, Editors: Y. Ozaki , 2013, p. P169 (Poster - Hofbauerová K.).
4.
Profantová (roz. Řezáčová) B., Zentz C., Kopecký Jr. V., Turpin P.Y., Štěpánek J.: Spectroscopic study of MADS-box segments and their interaction woth DNA. 15th European Conference on the Spectroscopy of Biological Molecules, Oxford, United Kingdom, August 25–30, 2013, Editors: T. Parker, 2013, p. 133 (Poster - Profantová (roz. Řezáčová) B.).
5.
Klener J., Štěpánek J.: UV Resonance Raman of Adenine Containing NA Constituents: Effect of Molecular Composition and Environmental Conditions. 7th International Conference on Advanced Vibrational Spectroscopy, Kobe, Japan, August 25–30, 2013, Editors: Y. Ozaki, 2013, p. P147 (Poster - Klener J.).
6.
Profantová (roz. Řezáčová) B., Profant V., Zíma V., Zentz C., Kruglik S.G., Bednárová L., Turpin P.Y., Štěpánek J.: Raman spectroscopy of a MADS box segment: experiments and calculations. 23rd International Conference on Raman Spectroscopy, Bangalore, India, August 12 – 17, 2012 (Poster - Profantová (roz. Řezáčová) B.).
7.
Řezáčová B., Coic Y.M., Zentz C., Turpin P.Y., Kruglik S.G., Profant V., Štěpánek J.: Spectroscopic study of the MADS box. Xth Discussions in Structural Molecular Biology, Nove Hrady, Czech Republic, March 22 – 24, 2012 (Poster - Řezáčová B.).
8.
Řezáčová B., Zentz C., Turpin P.Y., Štěpánek J.: Investigation of MADS box intrinsic fluorophores. 12th Conference on Methods and Applications of Fluorescence Spectroscopy, Imaging and Probes, Strasbourg, France, 11-14 September, 2011, p. 261 (Poster - Řezáčová B.).
9.
Kopecký Jr. V., Hofbauerová K., Kohoutová J., Štěpánek J., Ettrich R.: Can drop coating deposition Raman spectroscopy distinguish shortcomings or inaccuracies in protein crystals?. 30th European Congress on Molecular Spectroscopy – Book of Abstracts, Florence, Italy, 29 August – 3 September, Editors: M. Becucci, C. Gellini, V. Schettino, 2010, p. 289 (Přednáška - Hofbauerová K.).
10.
Praus P., Kočišová E., Mojzeš P., Štěpánek J., Sureau F., Turpin P.Y.: Cellular uptake of modified oligonucleotides enhanced by zinc porphyrins studied by time-resolved microspectrofluorimetry and fluorescence imaging techniques. 30th European Congress on Molecular Spectroscopy - Book of Abstracts, Frorence, Italy, 29 August - 3 September 2010, Editors: M. Becucci, C. Gellini, V. Schettino, 2010, p. 105.
11.
Řezáčová B., Zentz C., Turpin P.Y., Štěpánek J.: Spectroscopic study of MADS box and its interaction with DNA. 30th European Congress on Molecular Spectroscopy, Florence, Italy, 29 August – 3 September, Editors: M. Becucci, C. Gellini, V. Schettino, 2010, p. 288 (Přednáška - Řezáčová B.).
12.
Espinoza Herrera S.J., Barvík Jr. I., Štěpánek J.: Spectroscopic Study of Magnesium Effect on Stability of RNA and DNA Triple Strand Polynucleotide. XXII International Conference on Raman Spectroscopy, AIP Conference Proceedings, vol. 1267, 2010, p. 613-614.
13.
Štěpánek J., Ottová P., Řezáčová B., Vachoušek J.: Raman monitoring of temperature induced structural changes in six.-member loop of HIV-1 TAR hairpin and its R06 aptamer. 5th International Conference on Advanced Vibrational Spectroscopy, Melbourne, 12-17 July, 2009, p. 65 (Přednáška - Štěpánek J.).
14.
Kopecký Jr. V., Hofbauerová K., Kohoutová J., Štěpánek J., Ettrich R.: Structure differences between protein crystals and solution structures monitored by Raman spectrscopy. XIII European Conference on the Spectroscopy of Biological Molecules – Book of Abstracts, Palermo, Italy, August 28 – September 2, Editors: A. Cupane, 2009, p. PB102.
15.
Ruszová-Chmelová K., Štěpánek J., Zachová J., Rosenberg I., Turpin P.Y.: Model of modidied internucleotide linkage for antisense use> Raman study of C-PCC(2'-5') nucleotide single crystal. 1st Meeting of the Czech and Slovak Structural Biologists Materials Structure, 2002, p. 47-48.
16.
Ruszová-Chmelová K., Štěpánek J., Zachová J., Rosenberg I., Turpin P.Y.: Model of Modified Internucleotide Linkage for Antisense Use: Study of G-pCC(2'-5') Nucleotide Single Crystal. 9th European Conference on the Spectroscopy of Biological Molecules, Charles University, Prague, Editors: Kopecký V. Jr., Ruszová K., Štěpánek J., 2001, p. 205.
17.
Barvík Jr. I., Štěpánek J., Bok J.: Fully Solvated Molecular Dynamics Simulations of a Duplex Formed by a Modified Oligonucleotide with the Isosteric Phosphonate Internucleoside Linkages and Its Natural Counterpart. Journal of Molecular Graphics and Modelling, 2000, p. 194.
18.
Barvík Jr. I., Štěpánek J., Bok J.: Molecular dynamics simulations of the oligonucleotide with the modified phosphate/phosphonate internucleotide linkage. Computer Physics Communications, 1999, p. 122.
19.
Štěpánek J., Hanuš J., Chmelová K., Turpin P.Y., Barvík Jr. I.: Optical spectroscopy study of nucleic acid interactions with newly synthesized complementary short-chain nucleic acids. Spectroscopy of Biological Molecules: New Directions, Editors: Greve J., Puppels G. J., Otto C., 1999, p. 215-218.
20.
Barvík Jr. I., Štěpánek J., Bok J.: Molecular dynamics simulations of nucleic acids: A) molecular dynamics simulations of the oligonucleotide with the modified phosphate/phosphonate internucleotide LINKAGE. General Physiology and Biophysics, 1998, p. 21-23 (Přednáška - Barvík Jr. I.).
Monografie
1.
Procházka M., Štěpánek J.: Surface-enhanced Raman Scattering (SERS) and its Application to Biomolecular and Cellular Investigation. Applications of Raman Spectroscopy to Biology - From Basic Studies to Disease Diagnosis , Amsterdam, Editors: M. Ghomi, ISBN: 978-1-60750-999-8, Publishers: IOS Press, 2012, p. 1-30.
2.
Štěpánek J., Vaisocherová H., Piliarik M.: Molecular Interactions in SPR Sensors. Surface Plasmon Resonance Based Sensors, Berlin, Editors: Springer, ISBN: 103-540-33918-3, 2006, p. 69-94.
3.
Štěpánek J., Němeček D., Bok J., Hanuš J., Ruszová K.: Triplex-like complexes formed in mixed solutions of adenosine and polyuridylic acid: Raman study. Ricordo di Alessandro Bertoluzza, Bologna, Editors: CLUEB, ISBN: 88-491-2112-1, 2003, p. 341-354.