Articles

1.

Palivec V., Kopecký Jr. V., Jungwirth P., Bouř P., Kaminský J., Martinez-Seara H.: Simulation of Raman and Raman optical activity of saccharides in solution. Physical Chemistry Chemical Physics, 2020, vol. 22, p. 1983-1993.

2.

Pazderková M., Maloň P., Zíma V., Hofbauerová K., Kopecký Jr. V., Kočišová E., Pazderka T., Čeřovský V., Bednárová L.: Interaction of Halictine-Related Antimicrobial Peptides with Membrane Models. International Journal of Molecular Sciences, 2019, vol. 20, p. 631.

3.

Chlouba T., Trojánek F., Kopecký Jr. V., López-Vidrier J., Hernandéz S., Hiller D., Gutsch S., Zacharias M., Malý P.: Pathways of carrier recombination in Si/SiO(2) nanocrystal superlattices. Journal of Applied Physics , 2019, vol. 126, p. 163101.

4.

Vaněk O., Celadová P., Skořepa O., Bláha J., Kalousková B., Dvorská A., Polachová E., Pucholtová H., Kavan D., Pompach P., Hofbauerová K., Kopecký Jr. V., Voigt S., Carlyle J.: Production of recombinant soluble dimeric C-type lectin-like receptors of rat natural killer cells. Scientific Reports, 2019, vol. 9, p. 17836.

5.

Knipper R., Mayerhöfer T., Kopecký Jr. V., Huebner U., Popp J.: Observation of giant infrared circular dichroism in plasmonic 2D-metamaterial arrays. ACS Photonics, 2018, vol. 5, p. 1176-1180.

6.

Knipper R., Kopecký Jr. V., Huebner U., Popp J., Mayerhöfer T.: Slit-enhanced chiral- and broadband infrared ultra-sensing. ACS Photonics, 2018, vol. 5, p. 3238-3245.

7.

Pazderka T., Kopecký Jr. V.: Drop coating deposition Raman spectroscopy of proteinogenic amino acids compared with their solution and crystalline state. Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy, 2017, vol. 185, p. 207-216.

8.

Tesař A., Kopecký Jr. V., Kočišová E., Bednárová L.: Dynamics of lipid layers with/without bounded antimicrobial peptide Halictine-1. Vibrational Spectroscopy, 2017, vol. 93, p. 42-51.

9.

Tretyachenko V., Vymětal J., Bednárová L., Kopecký Jr. V., Hofbauerová K., Jindrová H., Huebner U., Souček R., Konvalinka J., Vondrášek J., Hlouchová K.: Random protein sequences can form defined secondary structures and are well-tolerated in vivo. Scientific Reports, 2017, vol. 7, p. 15449.

10.

Machova I., Huebner U., Lepšík M., Bednárová L., Pazderková M., Kopecký Jr. V., Snášel J., Dostál J., Pichová I.: The role of cysteine residues in catalysis of phosphoenolpyruvate carboxykinase from Mycobacterium tuberculosis. PLoS One , 2017, vol. 12, p. E0170373.

11.

Kopecký Jr. V., Ettrich R., Pazderka T., Hofbauerová K., Řeha D., Baumruk V.: Influence of ligand binding on structure and thermostability of human alpha(1)-acid glycoprotein. Journal of Molecular Recognition, 2016, vol. 29, p. 70-79.

12.

Štěpánek J., Kopecký Jr. V., Turpin P.Y., Li Z., Alpert B., Zentz C.: DNA electric charge oscillations govern protein–DNA recognition. PLoS One, 2015, vol. 10, p. 0124444 (11.

13.

Koukalová A., Pokorná S., Fišer R., Kopecký Jr. V., Humpolíčková J., Černý J., Hof M.: Membrane Activity of the Pentaene Macrolide Didehydroroflamycoin in Model Lipid Bilayers. Biochimica et Biophysica Acta - Biomembranes, 2015, vol. 1848, p. 444-452.

14.

Profantová (roz. Řezáčová) B., Coic Y.M., Profant V., Štěpánek J., Kopecký Jr. V., Turpin P.Y., Alpert B., Zentz C.: Organization of the MADS box from human SRF revealed by tyrosine perturbation. Journal of Physical Chemistry B , 2015, vol. 119, p. 1793-1801.

15.

Klener J., Hofbauerová K., Bartoš A., Říčný J., Řípová D., Kopecký Jr. V.: Instability of cerebrospinal fluid after delayed storage and repeated freezing: a holistic study by drop coating deposition Raman spectroscopy. Clinical Chemistry and Laboratory Medicine, 2014, vol. 52, p. 657-664.

16.

Profantová (roz. Řezáčová) B., Profant V., Zíma V., Kopecký Jr. V., Bednárová L., Zentz C., Baumruk V., Turpin P.Y., Štěpánek J.: Protonation effect of tyrosine in a segment of the SRF transcription factor: A combined optical spectroscopy, molecular dynamics, and density functional theory calculation study. Journal of Physical Chemistry B, 2013, vol. 117, p. 16086-16095.

17.

Pazderková M., Kočišová E., Pazderka T., Maloň P., Kopecký Jr. V., Monincová L., Čeřovský V., Bednárová L.: Antimicrobial peptides from the eusocial bee Halictus sexcinctus interacting with model membranes. Spectroscopy: An International Journal, 2012, vol. 27, p. 497-502.

18.

Kopecký Jr. V., Kohoutová J., Lapkouski M., Hofbauerová K., Sovová Ž., Ettrichová O., González-Pérezc S., Dulebo A., Kaftan D., Kutá-Smatanová I., Revuelta J.L., Arellano J.B., Carey J., Ettrich R.: Raman spectroscopy adds complementary detail to the high-resolution x-ray crystal structure of photosynthetic PsbP from Spinacia oleracea. PLoS One, 2012, vol. 7, p. E46694.

19.

Kříž M., Snášel J., Kopecký Jr. V., Páv O., Rosenberg I., Štěpánek J.: Structural changes of human RNase L upon homodimerization investigated by Raman spectroscopy. Biochimica et Biophysica Acta – Proteins and Proteomics, 2012, vol. 1824, p. 1039-1044.

20.

Pazderka T., Kopecký Jr. V.: Two-dimensional correlation analysis of Raman optical activity - basic rules and data treatment. Vibrational Spectroscopy, 2012, vol. 60, p. 193-199.

21.

Kopecký Jr. V., Baumruk V.: Kam kráčí Ramanova optická aktivita aneb ohlédnutí za uplynulými 40 lety. Chemické listy, 2011, vol. 105, p. 162-169.

22.

Kolenko P., Rozbeský D., Vaněk O., Kopecký Jr. V., Hofbauerová K., Novák P., Pompach P., Hašek J., Skálová T., Bezouška K., Dohnálek J.: Molecular architecture of mouse activating NKR-P1 receptors. Journal of Structural Biology, 2011, vol. 175, p. 434-441.

23.

Sovová Ž., Kopecký Jr. V., Pazderka T., Hofbauerová K., Rozbeský D., Vaněk O., Bezouška K., Ettrich R.: Structural analysis of natural killer cell receptor protein 1 (NKR-P1) extracellular domains suggests a conserved long loop region involved in ligand specificity. Journal of Molecular Modeling, 2011, vol. 17, p. 1353-1370.

24.

Pressová M., Buděšínský M., Košiová I., Kopecký Jr. V., Cvačka J., Kašička V., Šimák O., Točík Z., Rosenberg I.: Oligomerization of adenosin-5'-O-ylmethylphosphonate, an isopolar AMP analogue: Evaluation of the route to short oligoadenylates. Biopolymers, 2010, vol. 93, p. 277-289.

25.

Štěpánek J., Kopecký Jr. V., Mezzetti A., Turpin P.Y., Paulin D., Alpert B., Zentz C.: Structural and dynamic changes of the serum response element and the core domain of serum response factor induced by their association. Biochemical and Biophysical Research Communications, 2010, vol. 391, p. 203-208.

26.

Krištofiková Z., Kopecký Jr. V., Hofbauerová K., Hovorková P., Řípová D.: Complex of amyloid beta peptides with 24-hydroxycholesterol and its effect on hemicholinium-3 sensitive carriers. Neurochemical Research, 2008, vol. 33, p. 412-421.

27.

Baumruk V., Kapitán J., Kopecký Jr. V., Bouř P., Maloň P.: Raman Optical Activity of Biomolecules: From Simple Models to Complex Systems. Perspectives in Vibrational Spectroscopy (AIP Conference Proceedings), 2008, vol. 1075, p. 23-27.

28.

Vaněk O., Nálezková M., Kavan D., Borovičková I., Pompach P., Novák P., Kumar V., Vannucci L., Hudeček J., Hofbauerová K., Kopecký Jr. V., Brynda J., Kolenko P., Dohnálek J., Kadeřávek P., Chmelík J., Gorčík L., Žídek L., Sklenář V., Bezouška K.: Soluble recombinant CD69 receptors optimized to have an exceptional physical and chemical stability display prolonged circulation and remain intact in the blood of mice. FEBS Journal, 2008, vol. 275, p. 5589-5606.

29.

Daneček P., Kapitán J., Baumruk V., Bednárová L., Kopecký Jr. V., Bouř P.: Anharmonic effects in IR, Raman, and Raman optical activity spectra of alanine and proline zwitterions. The Journal of Chemical Physics, 2007, vol. 126, p. 224513.

30.

Ettrich R., Kopecký Jr. V., Hofbauerová K., Baumruk V., Novák P., Pompach P., Man P., Plíhal O., Kutý M., Kulik N., Sklenář J., Ryšlavá H., Křen V., Bezouška K.: Structure of the dimeric N-glycosylated form of fungal beta-N-acetylhexosaminidase revealed by computer modeling, vibrational spectroscopy, and biochemical studies. BMC Structural Biology, 2007, vol. 7, p. 32.

31.

Kapitán J., Baumruk V., Kopecký Jr. V., Bouř P.: Conformational flexibility of L-alanine Zwitterion determines shapes of Raman and Raman optical activity spectral bands. The Journal of Physical Chemistry A, 2006, vol. 110, p. 4689-4696.

32.

Kapitán J., Baumruk V., Kopecký Jr. V., Pohl R., Bouř P.: Proline zwitterion dynamics in solution, glass, and crystalline state. Journal of the American Chemical Society, 2006, vol. 128, p. 13451-13462.

33.

Ristvejová J., Kopecký Jr. V., Sovová Ž., Balsera M., Arellano J.B., Green M., Ettrich R.: Structure and dynamics of the N-terminal loop of PsbQ from photosystem II of Spinacia oleracea. Biochemical and Biophysical Research Communications, 2006, vol. 345, p. 287-291.

34.

Kopecký Jr. V., Baumruk V.: Structure of the ring in drop coating deposited proteins and its implication for Raman spectroscopy of biomolecules. Vibrational Spectroscopy, 2006, vol. 42, p. 184-187.

35.

Kopecký Jr. V., Ettrich R., Hofbauerová K., Baumruk V.: Vibrational spectroscopy and computer modeling of proteins: solving structure of alpha(1)-acid glycoprotein. Spectroscopy: An International Journal, 2004, vol. 18, p. 323-330.

36.

Hofbauerová K., Kopecký Jr. V., Ettrich R., Kubala M., Teisinger J., Amler E.: ATP-binding is stabilized by a stacking interaction within the binding site of Na+/K+-ATPase. Biochemical and Biophysical Research Communications, 2003, vol. 306, p. 416-420.

37.

Kubala M., Teisinger J., Ettrich R., Hofbauerová K., Kopecký Jr. V., Baumruk V., Krumscheid R., Plášek J., Schoner W., Amler E.: Eight amino acids form the ATP recognition site of Na+/K+-ATPase. Biochemistry, 2003, vol. 42, p. 6446-6452.

38.

Pavlíček J., Sopko B., Ettrich R., Kopecký Jr. V., Baumruk V., Man P., Havlíček V., Vrbacký M., Martínková L., Křen V., Pospíšil M., Bezouška K.: Molecular Characterization of Binding of Calcium and Carbohydrates by an Early Activation Antigen of Lymphocytes CD69. Biochemistry, 2003, vol. 42, p. 9295-9306.

39.

Kopecký Jr. V., Ettrich R., Hofbauerová K., Baumruk V.: Structure of human α1-acid glycoprotein and its high-affinity binding site. Biochemical and Biophysical Research Communications, 2003, vol. 300, p. 41-46.

40.

Hofbauerová K., Kopecký Jr. V., Sýkora J., Karpenko V.: Thermal stability of the human blood serum acid α1-glycoprotein in acidic media. Biophysical Chemistry, 2003, vol. 103, p. 25-33.

41.

Kubala M., Hofbauerová K., Ettrich R., Kopecký Jr. V., Krumscheid R., Plášek J., Teisinger J., Schoner W., Amler E.: Phe475 and Glu446 but not Ser445 participate in ATP-binding to the α-subunit of Na+/K+-ATPase. Biochemical and Biophysical Research Communications, 2002, vol. 297, p. 154-159.

42.

Kopecký Jr. V., Mojzeš P., Burda J.V., Dostál L.: Raman spectroscopy study of acid–base and structural properties of 9-[2-(phosphonomethoxy)ethyl]adenine in aqueous solutions. Biopolymers, 2002, vol. 67, p. 285-288.

43.

Hofbauerová K., Kopecký Jr. V., Ettrich R., Ettrichová O., Amler E.: Secondary and tertiary structure of nucleotide-binding domain of αsubunit of Na+/K+-ATPase. Biopolymers, 2002, vol. 67, p. 242-246.

44.

Ettrich R., Brandt W., Kopecký Jr. V., Baumruk V., Hofbauerová K., Pavlíček J.: Study of Chaperone-Like Activity of Human Haptoglobin: Conformational Changes under Heat Shock Conditions and Localization of Interaction Sites. Biological Chemistry, 2002, vol. 383, p. 1667-1676.

45.

Zachová J., Císařová I., Kopecký Jr. V., Mojzeš P.: X-Ray and Raman Structure Study of 9-[2-(Phosphonyl)Methoxyethyl]Adenine, PMEA - a Potent Antiviral Compound. Chemical papers, 1998, vol. 52, p. 286-287.

Conference proceedings

1.

Kopecký Jr. V., Pazderka T., Hofbauerová K., Baumruk V.: 2D Correlation Analysis of Lysozyme Fibrillation Studied by Raman Optical Activity and Raman Spectroscopy. 6th International Congress on Microscopy & Spectroscopy, Oludeniz, Turkey, May 12–18, 2019, Editors: A. Yavuz Oral et al., 2019, p. 38 (Invited lecture - Kopecký Jr. V.).

2.

Kopecký Jr. V., Hofbauerová K., Baumruk V.: Carbohydrate antennas of glycoproteins investigated by Raman spectroscopy and Raman optical activity. 26th International Conference on Raman Spectroscopy (ICORS 2018), Jeju, Korea, August 26–31, 2018, Editors: D. Kim & Y. M. Jung , 2018, p. 460-461 (Invited lecture - Kopecký Jr. V.).

3.

Kopecký Jr. V.: Drop-coating deposition Raman spectroscopy in protein research. 5th International Congress on Microscopy & Spectroscopy, Oludeniz, Turkey, April 24–30, 2018, Editors: A. Yavuz Oral et al., 2018, p. 59 (Invited lecture - Kopecký Jr. V.).

4.

Hofbauerová K., Kopecký Jr. V., Kočišová E., Procházka M., Štěpánek J.: General Applicability of Drop-Coating Deposition Raman Spectroscopy. 5th International Congress on Microscopy & Spectroscopy, Oludeniz, Turkey, April 24–30, 2018, Editors: A. Yavuz Oral et al., 2018, p. 85 (Poster - Hofbauerová K.).

5.

Kaminský J., P P., Pohl R., Kopecký Jr. V., Martinez-Seara Monne H.: Structure and interactions of saccharides studied by vibrational optical activity methods. XXXIV European Congress on Molecular Spectroscopy (EUCMOS 2018), Coimbra, Portugal, August 19–24, 2018, Editors: R. Fausto, E. M. Brás, L. L. G. Justino, B. A. Nogueira , 2018, p. 117 (Lecture - Kaminský J.).

6.

Hofbauerová K., Kopecký Jr. V., Barvík Jr. I., Klener J., Teisinger J.: Study of new binding sites for calmodulin on transient receptor potential channels of melastatin TRPM5, TRPM6, and TRPM7 N-termini. 26th International Conference on Raman Spectroscopy (ICORS 2018), Jeju, Korea, August 26–31, 2018, Editors: D. Kim & Y. M. Jung , 2018, p. 1153-1154 (Poster - Hofbauerová K.).

7.

Mojzeš P., Římal V., Mudroňová K., Klener J., Hofbauerová K., Kopecký Jr. V., Bednárová L.: Interquadruplex transitions of human telomeric sequences in K+ solutions under molecular crowding conditions and sub-melting temperatures. 6th International Meeting on Quadruplex Nucleic Acids: G4thering, Prague, Czech Republic, 31 May - 3 June 2017, 2017, p. 93 (Poster - Mojzeš P.).

8.

Mudroňová K., Klener J., Mojzeš P., Hofbauerová K., Kopecký Jr. V., Bednárová L.: Interquadruplex transitions of human telomeric sequences in K+ solutions under molecular crowding conditions and sub-melting temperatures. 33th European Congress on Molecular Spectroscopy - Book of Abstracts, Szeged, Hungary, 30 July - 4 August 2016, Editors: I. Pálinkó, 2016, p. 163 (Poster - Mudroňová K.).

9.

Kopecký Jr. V., Mojzeš P., Hofbauerová K., Baumruk V.: 5'-GMP quartets and G-quadruplexes in human telomere investigated by Raman optical activity (ROA). 15th International Conference on Chiroptical Spectroscopy, Sapporo, Japan, August 30 – September 3, 2015, Editors: K. Monde, R. Kuroda, 2015, p. 139 (Poster - Kopecký Jr. V.).

10.

Kopecký Jr. V., Hofbauerová K., Baumruk V.: Carbohydrate part of glycoproteins studied by vibrational circular dichroism (VCD). 15th International Conference on Chiroptical Spectroscopy, Sapporo, Japan, August 30 – September 3, 2015, Editors: K. Monde, R. Kuroda , 2015, p. 127 (Poster - Hofbauerová K.).

11.

Bednárová L., Machova I., Kopecký Jr. V., Pazderková M., Snášel J., Dostál J., Huebner U., Pichová I.: Spectroscopic studies of phosphoenolpyruvate carboxykinase from Mycobacterium tuberculosis. 16th European Conference on the Spectroscopy of Biological Molecules, Bochum, Germany, September 6–10, 2015, Editors: K. Gerwert , 2015, p. 221 (Poster - Bednárová L.).

12.

Bednárová L., Pazderková M., Maloň P., Dlouhá H., Kočišová E., Kopecký Jr. V.: Antibacterial peptides interacting with model membranes – Spectroscopic study. 11th Discussions in Structural Molecular Biology, Materials Structure vol. 20, Nové Hrady, Czech Republic, March 14–16, 2013, Editors: R. Kužel et al., 2013, p. 8 (Lecture - Bednárová L.).

13.

Kopecký Jr. V., Hofbauerová K., Kohoutová J., Kříž M., Klener J., Ettrich R., Štěpánek J.: Application of drop coating deposition Raman spectrscopy in protein structural studies. 7th International Conference on Advanced Vibrational Spectroscopy, Kobe, Japan, August 25–30, 2013, Editors: Y. Ozaki , 2013, p. P169 (Poster - Hofbauerová K.).

14.

Kopecký Jr. V., Hofbauerová K., Baumruk V.: Carbohydrate antennas of glycoproteins investigated by Raman spectroscopy and Raman optical activity. 7th International Conference on Advanced Vibrational Spectroscopy, Kobe, Japan, August 25–30, 2013, Editors: Y. Ozaki , 2013, p. P238 (Poster - Kopecký Jr. V.).

15.

Profantová (roz. Řezáčová) B., Zentz C., Kopecký Jr. V., Turpin P.Y., Štěpánek J.: Spectroscopic study of MADS-box segments and their interaction woth DNA. 15th European Conference on the Spectroscopy of Biological Molecules, Oxford, United Kingdom, August 25–30, 2013, Editors: T. Parker, 2013, p. 133 (Poster - Profantová (roz. Řezáčová) B.).

16.

Pazderka T., Hofbauerová K., Bednárová L., Baumruk V., Kopecký Jr. V.: Structure and dynamics of human haptoglobin phenotypes. 14th International Conference on Chiroptical Spectroscopy, Nashville, USA, June 9-13, 2013, Editors: P. L. Polavarapu, 2013, p. P46 (Poster - Pazderka T.).

17.

Pazderka T., Hofbauerová K., Baumruk V., Kopecký Jr. V.: Structure and dynamics of human haptoglobin phenotypes by menas of vibrational spectrscopy. 7th International Conference on Advanced Vibrational Spectroscopy, Kobe, Japan, August 25–30, 2013, Editors: Y. Ozaki , 2013, p. P167 (Poster - Pazderka T.).

18.

Pazderková M., Kočišová E., Pazderka T., Souček P., Maloň P., Kopecký Jr. V., Bednárová L.: Antimicrobial peptide from eusocial bee Halictus sexcinctus interacting with model membranes. 31st European Congress on Molecular Spectroscopy, Cluj-Napoca, Romania, August 26–31, 2012, Editors: K. Nagy-Póra, V. Chiş, S. Aştilean, O. Cozar , 2012, p. 220 (Poster - Pazderková M.).

19.

Pazderka T., Hofbauerová K., Kopecký Jr. V.: Comparison of structure and dynamics of human haptoglobin phenotypes monitored by vibrational spectroscopy. 31st European Congress on Molecular Spectroscopy, Cluj-Napoca, Romania, August 26–31, 2012, Editors: K. Nagy-Póra, V. Chiş, S. Aştilean, O. Cozar, 2012, p. 219 (Poster - Pazderka T.).

20.

Pazderka T., Hofbauerová K., Baumruk V., Kopecký Jr. V.: Comparison of structure of human haptoglobin phenotypes investigated by Raman spectroscopy and Raman optical activity. 23th International Conference on Raman Spectroscopy, Bangalore, India, August 12–17, 2012, Editors: S. Umapathy , 2012, p. 106 (Poster - Pazderka T.).

21.

Pazderka T., Kopecký Jr. V., Hofbauerová K., Baumruk V.: Different kinds of protein oligomerization investigated by Raman optical activity. Workshop CECAM 2012 – Vibrational Optical Activity: Interplay of Theory and Experiment, Pisa, Italy, September 23–27, 2012, Editors: C. Cappelli, K. Ruud, M. Pecul-Kudelska, R. Dukor, 2012, p. 53 (Poster - Pazderka T.).

22.

Klener J., Hofbauerová K., Bartoš A., Řípová D., Kopecký Jr. V.: Drop coating deposition Raman spectroscopy as the diagnostic tool of Alzheimer disease. 23th International Conference on Raman Spectroscopy, Bangalore, India, August 12–17, Editors: S. Umapathy , 2012, p. 50 (Poster - Klener J.).

23.

Pazderka T., Kopecký Jr. V., Hofbauerová K., Baumruk V.: 2D correlation analysis of lysozyme fibrillation studied by Raman optical activity and Raman spectroscopy. 13th International Conference on Chiroptical Spectroscopy – CD 2011, Oxford, United Kingdom, July 24–28, 2011, Editors: G. Siligardi, R. Hussain, L. Barron, G. Tranter , 2011, p. 34 (Lecture - Kopecký Jr. V.).

24.

Pazderka T., Kopecký Jr. V., Hofbauerová K., Baumruk V.: 2D correlation analysis of lysozyme fibrillation studied by Raman optical activity and Raman spectroscopy. Sixth International Conference on Advanced Vibrational Spectroscopy (ICAVS-6), Sonoma County, California, 12-17 June, 2011 (Poster - Pazderka T.).

25.

Pazderková M., Kočišová E., Pazderka T., Maloň P., Kopecký Jr. V., Bednárová L.: Antibacterial peptides interacting with model memmbranes – IR and CD study. 13th International Conference on Chiroptical Spectroscopy – CD 2011, Oxford, United Kingdom, July 24–28, 2011, Editors: G. Siligardi, R. Hussain, L. Barron, G. Tranter , 2011, p. 73.

26.

Kopecký Jr. V., Pazderka T., Hofbauerová K., Baumruk V.: Lysozyme fibrillation probed by 2D correlation analysis of Raman and Raman optical activity spectra. 1st Visegrad Symposium on Structural Systems Biology, Nové Hrady, Czech Republic, 29th November-2nd December 2011, Editors: R. Ettrich, B. Minofar, A. Zupčanová, D. Řeha, 2011, p. 18 (Invited lecture - Kopecký Jr. V.).

27.

Pazderka T., Kopecký Jr. V., Hofbauerová K., Baumruk V.: Novel approach to protein structure determination by optical spectroscopies. 13th International Conference on Chiroptical Spectroscopy – CD 2011, Oxford, United Kingdom, July 24–28, 2011, Editors: G. Siligardi, R. Hussain, L. Barron, G. Tranter, 2011, p. 112.

28.

Pazderka T., Kopecký Jr. V.: Two-dimensional correlation spectroscopy of Raman optical activity. Sixth International Meeting on 2-Dimensional Correlation Spectroscopy (2DCOS-6), Sonoma County, California, June 9-12, 2011 (Poster - Pazderka T.).

29.

Pazderka T., Kopecký Jr. V., Hofbauerová K., Baumruk V.: 2D correlation analysis of lysozyme fibrillation studied by Raman spectroscopy and Raman optical activity. 22nd International Symposium on Chirality (ISCD-22) – Program and Abstracts, Sapporo, Japan, July 12–15, Editors: E. Yashima, 2010, p. 242.

30.

Bednárová L., Maloň P., Dlouhá H., Kubáňová M., Mojzeš P., Kočišová E., Hofbauerová K., Kopecký Jr. V.: Antibacterial peptides in interaction with model membranes studied by various spectroscopic methods. 30th European Congress on Molecular Spectroscopy – Book of Abstracts, Florence, Italy, 29 August – 3 September, Editors: M. Becucci, C. Gellini, V. Schettino, 2010, p. 95.

31.

Bednárová L., Maloň P., Dlouhá H., Kočišová E., Hofbauerová K., Kopecký Jr. V.: Antibacterial peptides in interaction with model membranes studied by various spectroscopic methods. 8th Discussions in Structural Molecular Biology – Materials Structure vol. 17, Nové Hrady, Czech Republic, March 18–20, Editors: . Schneider, I. Kutá-Smatanová, R. Kužel, D. Štys, R. Ettrich, J. Hašek, 2010, p. B32.

32.

Kopecký Jr. V., Hofbauerová K., Kohoutová J., Štěpánek J., Ettrich R.: Can drop coating deposition Raman spectroscopy distinguish shortcomings or inaccuracies in protein crystals?. 30th European Congress on Molecular Spectroscopy – Book of Abstracts, Florence, Italy, 29 August – 3 September, Editors: M. Becucci, C. Gellini, V. Schettino, 2010, p. 289 (Lecture - Hofbauerová K.).

33.

Kopecký Jr. V., Hofbauerová K., Baumruk V.: Carbohydrate part of intact glycoproteins studied by Raman optical activity (ROA). 22nd International Symposium on Chirality (ISCD-22) – Program and Abstracts, Sapporo, Japan, July 12–15, Editors: E. Yashima, 2010, p. 241.

34.

Krištofiková Z., Kopecký Jr. V., Hofbauerová K., Kříž Z., Řípová D.: Interactions of amyloid beta peptides and cerebrosterol are not fully stereospecific. 7th European Neuroscience – FENS Forum 2010 – Book of Abstracts vol. 5, Amsterdam, The Netherlands, July 3–7, 2010, p. 07850.

35.

Pazderka T., Kopecký Jr. V., Hofbauerová K., Baumruk V.: Raman and infrared spectroscopy of amino acids and its implication for improvement of the protein secondary structure determination. 30th European Congress on Molecular Spectroscopy – Book of Abstracts, Florence, Italy, 29 August – 3 September, Editors: M. Becucci, C. Gellini, V. Schettino, 2010, p. 132.

36.

Kopecký Jr. V., Hofbauerová K., Kohoutová J., Lapkouski M., Sovová Ž., Kutá-Smatanová I., Ettrich R.: Structure differences between protein crystals and solution structures monitored by Raman spectroscopy – case study of PsbP protein. 8th Discussions in Structural Molecular Biology – Materials Structure vol. 17, Nové Hrady, Czech Republic, March 18–20, Editors: . Schneider, I. Kutá-Smatanová, R. Kužel, D. Štys, R. Ettrich, J. Hašek , 2010, p. B6 (Lecture - Kopecký Jr. V.).

37.

Pazderka T., Kopecký Jr. V., Hofbauerová K., Baumruk V.: Two-dimensional Raman and Raman optical activity correlation and factor analysis of lysozyme fibrillation. 30th European Congress on Molecular Spectroscopy – Book of Abstracts, Florence, Italy, 29 August – 3 September, Editors: M. Becucci, C. Gellini, V. Schettino, 2010, p. 84 (Lecture - Kopecký Jr. V.).

38.

Pazderka T., Kopecký Jr. V., Hofbauerová K., Baumruk V.: Two-dimensional Raman and Raman optical activity correlation and factor analysis of lysozyme fibrillation. 8th Discussions in Structural Molecular Biology – Materials Structure vol. 17, Nové Hrady, Czech Republic, March 18–20, Editors: B. Schneider, I. Kutá-Smatanová, R. Kužel, D. Štys, R. Ettrich, J. Hašek, 2010, p. B47.

39.

Kohoutová J., Kopecký Jr. V., Lapkouski M., Hofbauerová K., Sovová Ž., González-Pérezc S., Kutá-Smatanová I., Revuelta J.L., Arellano J.B., Ettrich R.: Structural analysis of the extrinsic PsbP protein of PSII from Spinacea oleracea and its interaction with the oxygen-evolving complex. 34th FEBS Congress – The FEBS Journal vol. 276, Prague, Czech Republic, July 4–9, 2009, p. 146-147.

40.

Kohoutová J., Kopecký Jr. V., Lapkouski M., Hofbauerová K., Sovová Ž., González-Pérezc S., Kutá-Smatanová I., Revuelta J.L., Arellano J.B., Ettrich R.: Structural analysis of the extrinsic PsbP protein of PSII from Spinacea oleracea by X-ray crystallography, Raman spectroscopy and bioinformatics. 7th Discussions in Structural Molecular Biology – Materials Structure vol. 16, Nové Hrady, Czech Republic, March 12–14, Editors: B. Schneider, I. Kutá-Smatanová, R. Kužel, D. Štys, J. Hašek, 2009, p. B32.

41.

Kopecký Jr. V., Hofbauerová K., Kohoutová J., Štěpánek J., Ettrich R.: Structure differences between protein crystals and solution structures monitored by Raman spectrscopy. XIII European Conference on the Spectroscopy of Biological Molecules – Book of Abstracts, Palermo, Italy, August 28 – September 2, Editors: A. Cupane, 2009, p. PB102.

42.

Pazderka T., Kopecký Jr. V., Hofbauerová K., Baumruk V.: Two-dimensional Raman and raman optical activity correlation and factor analysis of lysozyme fibrillation. XIII European Conference on the Spectroscopy of Biological Molecules – Book of Abstracts, Palermo, Italy, August 28 – September 2, Editors: A. Cupane, 2009, p. PB102.

43.

Pazderka T., Kopecký Jr. V.: 2D correlation spectroscopy and its application in vibrational spectroscopy using Matlab. Technical Computing Prague 2008, Prague, November 11, Editors: Procházka, A., Pavelka, A., 2008 (Lecture - Pazderka T.).

44.

Kapitán J., Kopecký Jr. V., Bok J., Praus P., Baumruk V.: Prague ROA spectrometer and new approaches to experimental data processing. 21st International Conference on Raman Spectroscopy – Book of Abstracts, ISBN 978-1-906715-00-7, London, Great Britain, August 17–22, Editors: R. Withnall, B. Z. Chowdhry, M Publications LLP, 2008, p. 566-567.

45.

Baumruk V., Kapitán J., Hrudíková J., Kopecký Jr. V., Maloň P., Bouř P.: Raman optical activity of biomolecules: from simple models to complex systems. 21st International Conference on Raman Spectroscopy – Book of Abstracts, ISBN 978-1-906715-00-7, London, Great Britain, August 17–22, Editors: R. Withnall, B. Z. Chowdhry, M Publications LLP, 2008, p. 561-562.

46.

Kopecký Jr. V., Pazderka T., Baumruk V.: Raman optical activity of carbohydrates and glycoproteins. Cukrblik 2007 – Current Chemistry and Biochemistry of Saccharides, Prague, Czech Republic, April 20, Editors: J. Moravcová, V. Křen, 2007 (Lecture - Kopecký Jr. V.).